Generate uniform path-index load_dataset configs

README.md

@@ -13,22 +13,31 @@ pretty_name: Dartbrains Localizer
 size_categories:
   - 1K<n<10K
 configs:
-  - config_name: betas
-    description: "Beta maps (individual condition + all-condition stacked) with subject, condition, and type labels"
+  - config_name: bold
     default: true
     data_files:
       - split: train
-        path: derivatives/betas/**
-  - config_name: betas_stacked
-    description: "All-condition stacked beta volumes per subject (NIfTI)"
+        path: bold.csv
+  - config_name: confounds
+    data_files:
+      - split: train
+        path: confounds.csv
+  - config_name: mask
+    data_files:
+      - split: train
+        path: mask.csv
   - config_name: events
-    description: "Task event files (onset, duration, trial_type) per subject"
+    data_files:
+      - split: train
+        path: events.csv
+  - config_name: betas
+    data_files:
+      - split: train
+        path: betas.csv
   - config_name: participants
-    description: "Participant demographics and metadata"
-  - config_name: fmriprep_bold
-    description: "Preprocessed BOLD data from fmriprep (NIfTI)"
-  - config_name: fmriprep_confounds
-    description: "Motion and physiological confound regressors from fmriprep"
+    data_files:
+      - split: train
+        path: participants.csv
 ---
 
 # Dartbrains Localizer Dataset

betas.csv

@@ -0,0 +1,221 @@
+path,subject,condition,type
+derivatives/betas/S01_beta_audio_computation.nii.gz,S01,audio_computation,individual
+derivatives/betas/S01_beta_audio_left_hand.nii.gz,S01,audio_left_hand,individual
+derivatives/betas/S01_beta_audio_right_hand.nii.gz,S01,audio_right_hand,individual
+derivatives/betas/S01_beta_audio_sentence.nii.gz,S01,audio_sentence,individual
+derivatives/betas/S01_beta_horizontal_checkerboard.nii.gz,S01,horizontal_checkerboard,individual
+derivatives/betas/S01_beta_vertical_checkerboard.nii.gz,S01,vertical_checkerboard,individual
+derivatives/betas/S01_beta_video_computation.nii.gz,S01,video_computation,individual
+derivatives/betas/S01_beta_video_left_hand.nii.gz,S01,video_left_hand,individual
+derivatives/betas/S01_beta_video_right_hand.nii.gz,S01,video_right_hand,individual
+derivatives/betas/S01_beta_video_sentence.nii.gz,S01,video_sentence,individual
+derivatives/betas/S01_betas.nii.gz,S01,,stacked
+derivatives/betas/S02_beta_audio_computation.nii.gz,S02,audio_computation,individual
+derivatives/betas/S02_beta_audio_left_hand.nii.gz,S02,audio_left_hand,individual
+derivatives/betas/S02_beta_audio_right_hand.nii.gz,S02,audio_right_hand,individual
+derivatives/betas/S02_beta_audio_sentence.nii.gz,S02,audio_sentence,individual
+derivatives/betas/S02_beta_horizontal_checkerboard.nii.gz,S02,horizontal_checkerboard,individual
+derivatives/betas/S02_beta_vertical_checkerboard.nii.gz,S02,vertical_checkerboard,individual
+derivatives/betas/S02_beta_video_computation.nii.gz,S02,video_computation,individual
+derivatives/betas/S02_beta_video_left_hand.nii.gz,S02,video_left_hand,individual
+derivatives/betas/S02_beta_video_right_hand.nii.gz,S02,video_right_hand,individual
+derivatives/betas/S02_beta_video_sentence.nii.gz,S02,video_sentence,individual
+derivatives/betas/S02_betas.nii.gz,S02,,stacked
+derivatives/betas/S03_beta_audio_computation.nii.gz,S03,audio_computation,individual
+derivatives/betas/S03_beta_audio_left_hand.nii.gz,S03,audio_left_hand,individual
+derivatives/betas/S03_beta_audio_right_hand.nii.gz,S03,audio_right_hand,individual
+derivatives/betas/S03_beta_audio_sentence.nii.gz,S03,audio_sentence,individual
+derivatives/betas/S03_beta_horizontal_checkerboard.nii.gz,S03,horizontal_checkerboard,individual
+derivatives/betas/S03_beta_vertical_checkerboard.nii.gz,S03,vertical_checkerboard,individual
+derivatives/betas/S03_beta_video_computation.nii.gz,S03,video_computation,individual
+derivatives/betas/S03_beta_video_left_hand.nii.gz,S03,video_left_hand,individual
+derivatives/betas/S03_beta_video_right_hand.nii.gz,S03,video_right_hand,individual
+derivatives/betas/S03_beta_video_sentence.nii.gz,S03,video_sentence,individual
+derivatives/betas/S03_betas.nii.gz,S03,,stacked
+derivatives/betas/S04_beta_audio_computation.nii.gz,S04,audio_computation,individual
+derivatives/betas/S04_beta_audio_left_hand.nii.gz,S04,audio_left_hand,individual
+derivatives/betas/S04_beta_audio_right_hand.nii.gz,S04,audio_right_hand,individual
+derivatives/betas/S04_beta_audio_sentence.nii.gz,S04,audio_sentence,individual
+derivatives/betas/S04_beta_horizontal_checkerboard.nii.gz,S04,horizontal_checkerboard,individual
+derivatives/betas/S04_beta_vertical_checkerboard.nii.gz,S04,vertical_checkerboard,individual
+derivatives/betas/S04_beta_video_computation.nii.gz,S04,video_computation,individual
+derivatives/betas/S04_beta_video_left_hand.nii.gz,S04,video_left_hand,individual
+derivatives/betas/S04_beta_video_right_hand.nii.gz,S04,video_right_hand,individual
+derivatives/betas/S04_beta_video_sentence.nii.gz,S04,video_sentence,individual
+derivatives/betas/S04_betas.nii.gz,S04,,stacked
+derivatives/betas/S05_beta_audio_computation.nii.gz,S05,audio_computation,individual
+derivatives/betas/S05_beta_audio_left_hand.nii.gz,S05,audio_left_hand,individual
+derivatives/betas/S05_beta_audio_right_hand.nii.gz,S05,audio_right_hand,individual
+derivatives/betas/S05_beta_audio_sentence.nii.gz,S05,audio_sentence,individual
+derivatives/betas/S05_beta_horizontal_checkerboard.nii.gz,S05,horizontal_checkerboard,individual
+derivatives/betas/S05_beta_vertical_checkerboard.nii.gz,S05,vertical_checkerboard,individual
+derivatives/betas/S05_beta_video_computation.nii.gz,S05,video_computation,individual
+derivatives/betas/S05_beta_video_left_hand.nii.gz,S05,video_left_hand,individual
+derivatives/betas/S05_beta_video_right_hand.nii.gz,S05,video_right_hand,individual
+derivatives/betas/S05_beta_video_sentence.nii.gz,S05,video_sentence,individual
+derivatives/betas/S05_betas.nii.gz,S05,,stacked
+derivatives/betas/S06_beta_audio_computation.nii.gz,S06,audio_computation,individual
+derivatives/betas/S06_beta_audio_left_hand.nii.gz,S06,audio_left_hand,individual
+derivatives/betas/S06_beta_audio_right_hand.nii.gz,S06,audio_right_hand,individual
+derivatives/betas/S06_beta_audio_sentence.nii.gz,S06,audio_sentence,individual
+derivatives/betas/S06_beta_horizontal_checkerboard.nii.gz,S06,horizontal_checkerboard,individual
+derivatives/betas/S06_beta_vertical_checkerboard.nii.gz,S06,vertical_checkerboard,individual
+derivatives/betas/S06_beta_video_computation.nii.gz,S06,video_computation,individual
+derivatives/betas/S06_beta_video_left_hand.nii.gz,S06,video_left_hand,individual
+derivatives/betas/S06_beta_video_right_hand.nii.gz,S06,video_right_hand,individual
+derivatives/betas/S06_beta_video_sentence.nii.gz,S06,video_sentence,individual
+derivatives/betas/S06_betas.nii.gz,S06,,stacked
+derivatives/betas/S07_beta_audio_computation.nii.gz,S07,audio_computation,individual
+derivatives/betas/S07_beta_audio_left_hand.nii.gz,S07,audio_left_hand,individual
+derivatives/betas/S07_beta_audio_right_hand.nii.gz,S07,audio_right_hand,individual
+derivatives/betas/S07_beta_audio_sentence.nii.gz,S07,audio_sentence,individual
+derivatives/betas/S07_beta_horizontal_checkerboard.nii.gz,S07,horizontal_checkerboard,individual
+derivatives/betas/S07_beta_vertical_checkerboard.nii.gz,S07,vertical_checkerboard,individual
+derivatives/betas/S07_beta_video_computation.nii.gz,S07,video_computation,individual
+derivatives/betas/S07_beta_video_left_hand.nii.gz,S07,video_left_hand,individual
+derivatives/betas/S07_beta_video_right_hand.nii.gz,S07,video_right_hand,individual
+derivatives/betas/S07_beta_video_sentence.nii.gz,S07,video_sentence,individual
+derivatives/betas/S07_betas.nii.gz,S07,,stacked
+derivatives/betas/S08_beta_audio_computation.nii.gz,S08,audio_computation,individual
+derivatives/betas/S08_beta_audio_left_hand.nii.gz,S08,audio_left_hand,individual
+derivatives/betas/S08_beta_audio_right_hand.nii.gz,S08,audio_right_hand,individual
+derivatives/betas/S08_beta_audio_sentence.nii.gz,S08,audio_sentence,individual
+derivatives/betas/S08_beta_horizontal_checkerboard.nii.gz,S08,horizontal_checkerboard,individual
+derivatives/betas/S08_beta_vertical_checkerboard.nii.gz,S08,vertical_checkerboard,individual
+derivatives/betas/S08_beta_video_computation.nii.gz,S08,video_computation,individual
+derivatives/betas/S08_beta_video_left_hand.nii.gz,S08,video_left_hand,individual
+derivatives/betas/S08_beta_video_right_hand.nii.gz,S08,video_right_hand,individual
+derivatives/betas/S08_beta_video_sentence.nii.gz,S08,video_sentence,individual
+derivatives/betas/S08_betas.nii.gz,S08,,stacked
+derivatives/betas/S09_beta_audio_computation.nii.gz,S09,audio_computation,individual
+derivatives/betas/S09_beta_audio_left_hand.nii.gz,S09,audio_left_hand,individual
+derivatives/betas/S09_beta_audio_right_hand.nii.gz,S09,audio_right_hand,individual
+derivatives/betas/S09_beta_audio_sentence.nii.gz,S09,audio_sentence,individual
+derivatives/betas/S09_beta_horizontal_checkerboard.nii.gz,S09,horizontal_checkerboard,individual
+derivatives/betas/S09_beta_vertical_checkerboard.nii.gz,S09,vertical_checkerboard,individual
+derivatives/betas/S09_beta_video_computation.nii.gz,S09,video_computation,individual
+derivatives/betas/S09_beta_video_left_hand.nii.gz,S09,video_left_hand,individual
+derivatives/betas/S09_beta_video_right_hand.nii.gz,S09,video_right_hand,individual
+derivatives/betas/S09_beta_video_sentence.nii.gz,S09,video_sentence,individual
+derivatives/betas/S09_betas.nii.gz,S09,,stacked
+derivatives/betas/S10_beta_audio_computation.nii.gz,S10,audio_computation,individual
+derivatives/betas/S10_beta_audio_left_hand.nii.gz,S10,audio_left_hand,individual
+derivatives/betas/S10_beta_audio_right_hand.nii.gz,S10,audio_right_hand,individual
+derivatives/betas/S10_beta_audio_sentence.nii.gz,S10,audio_sentence,individual
+derivatives/betas/S10_beta_horizontal_checkerboard.nii.gz,S10,horizontal_checkerboard,individual
+derivatives/betas/S10_beta_vertical_checkerboard.nii.gz,S10,vertical_checkerboard,individual
+derivatives/betas/S10_beta_video_computation.nii.gz,S10,video_computation,individual
+derivatives/betas/S10_beta_video_left_hand.nii.gz,S10,video_left_hand,individual
+derivatives/betas/S10_beta_video_right_hand.nii.gz,S10,video_right_hand,individual
+derivatives/betas/S10_beta_video_sentence.nii.gz,S10,video_sentence,individual
+derivatives/betas/S10_betas.nii.gz,S10,,stacked
+derivatives/betas/S11_beta_audio_computation.nii.gz,S11,audio_computation,individual
+derivatives/betas/S11_beta_audio_left_hand.nii.gz,S11,audio_left_hand,individual
+derivatives/betas/S11_beta_audio_right_hand.nii.gz,S11,audio_right_hand,individual
+derivatives/betas/S11_beta_audio_sentence.nii.gz,S11,audio_sentence,individual
+derivatives/betas/S11_beta_horizontal_checkerboard.nii.gz,S11,horizontal_checkerboard,individual
+derivatives/betas/S11_beta_vertical_checkerboard.nii.gz,S11,vertical_checkerboard,individual
+derivatives/betas/S11_beta_video_computation.nii.gz,S11,video_computation,individual
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+derivatives/betas/S11_beta_video_right_hand.nii.gz,S11,video_right_hand,individual
+derivatives/betas/S11_beta_video_sentence.nii.gz,S11,video_sentence,individual
+derivatives/betas/S11_betas.nii.gz,S11,,stacked
+derivatives/betas/S12_beta_audio_computation.nii.gz,S12,audio_computation,individual
+derivatives/betas/S12_beta_audio_left_hand.nii.gz,S12,audio_left_hand,individual
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+derivatives/betas/S12_beta_audio_sentence.nii.gz,S12,audio_sentence,individual
+derivatives/betas/S12_beta_horizontal_checkerboard.nii.gz,S12,horizontal_checkerboard,individual
+derivatives/betas/S12_beta_vertical_checkerboard.nii.gz,S12,vertical_checkerboard,individual
+derivatives/betas/S12_beta_video_computation.nii.gz,S12,video_computation,individual
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+derivatives/betas/S12_beta_video_right_hand.nii.gz,S12,video_right_hand,individual
+derivatives/betas/S12_beta_video_sentence.nii.gz,S12,video_sentence,individual
+derivatives/betas/S12_betas.nii.gz,S12,,stacked
+derivatives/betas/S13_beta_audio_computation.nii.gz,S13,audio_computation,individual
+derivatives/betas/S13_beta_audio_left_hand.nii.gz,S13,audio_left_hand,individual
+derivatives/betas/S13_beta_audio_right_hand.nii.gz,S13,audio_right_hand,individual
+derivatives/betas/S13_beta_audio_sentence.nii.gz,S13,audio_sentence,individual
+derivatives/betas/S13_beta_horizontal_checkerboard.nii.gz,S13,horizontal_checkerboard,individual
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+derivatives/betas/S13_beta_video_right_hand.nii.gz,S13,video_right_hand,individual
+derivatives/betas/S13_beta_video_sentence.nii.gz,S13,video_sentence,individual
+derivatives/betas/S13_betas.nii.gz,S13,,stacked
+derivatives/betas/S14_beta_audio_computation.nii.gz,S14,audio_computation,individual
+derivatives/betas/S14_beta_audio_left_hand.nii.gz,S14,audio_left_hand,individual
+derivatives/betas/S14_beta_audio_right_hand.nii.gz,S14,audio_right_hand,individual
+derivatives/betas/S14_beta_audio_sentence.nii.gz,S14,audio_sentence,individual
+derivatives/betas/S14_beta_horizontal_checkerboard.nii.gz,S14,horizontal_checkerboard,individual
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+derivatives/betas/S14_beta_video_sentence.nii.gz,S14,video_sentence,individual
+derivatives/betas/S14_betas.nii.gz,S14,,stacked
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+derivatives/betas/S15_beta_video_sentence.nii.gz,S15,video_sentence,individual
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+derivatives/betas/S18_betas.nii.gz,S18,,stacked
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+derivatives/betas/S20_beta_video_computation.nii.gz,S20,video_computation,individual
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+derivatives/betas/S20_beta_video_sentence.nii.gz,S20,video_sentence,individual
+derivatives/betas/S20_betas.nii.gz,S20,,stacked

bold.csv

@@ -0,0 +1,95 @@
+path,subject,task,space,desc
+derivatives/fmriprep/sub-S01/func/sub-S01_task-localizer_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz,S01,localizer,MNI152NLin2009cAsym,preproc
+derivatives/fmriprep/sub-S02/func/sub-S02_task-localizer_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz,S02,localizer,MNI152NLin2009cAsym,preproc
+derivatives/fmriprep/sub-S03/func/sub-S03_task-localizer_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz,S03,localizer,MNI152NLin2009cAsym,preproc
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confounds.csv

@@ -0,0 +1,95 @@
+path,subject,task,desc
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+derivatives/fmriprep/sub-S04/func/sub-S04_task-localizer_desc-confounds_regressors.tsv,S04,localizer,confounds
+derivatives/fmriprep/sub-S05/func/sub-S05_task-localizer_desc-confounds_regressors.tsv,S05,localizer,confounds
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+derivatives/fmriprep/sub-S07/func/sub-S07_task-localizer_desc-confounds_regressors.tsv,S07,localizer,confounds
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events.csv

@@ -0,0 +1,95 @@
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mask.csv

@@ -0,0 +1,283 @@
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